STRINGSTRING
ABK73035.1 ABK73035.1 ABK69832.1 ABK69832.1 ABK71731.1 ABK71731.1 ABK74735.1 ABK74735.1 ABK70610.1 ABK70610.1 ABK74349.1 ABK74349.1 ABK73328.1 ABK73328.1 ABK75958.1 ABK75958.1 ABK72606.1 ABK72606.1 pdxH pdxH ABK70463.1 ABK70463.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73035.1Helix-turn-helix motif. (147 aa)    
Predicted Functional Partners:
ABK69832.1
Acyltransferase, ws/dgat/mgat subfamily protein; Identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; Belongs to the long-chain O-acyltransferase family.
  
    0.807
ABK71731.1
Identified by match to protein family HMM PF00582.
 
  
 0.791
ABK74735.1
Conserved hypothetical protein.
  
  
 0.727
ABK70610.1
GAF family protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730.
  
    0.637
ABK74349.1
Two component transcriptional regulatory protein devr; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
  
  
 0.615
ABK73328.1
ATPase.
 
     0.524
ABK75958.1
Identified by match to protein family HMM PF02562.
 
    0.520
ABK72606.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
  
 0.509
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
  
  
 0.477
ABK70463.1
Conserved hypothetical protein.
  
  
 0.476
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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