STRINGSTRING
ABK71912.1 ABK71912.1 uppS-2 uppS-2 ABK69649.1 ABK69649.1 ABK74729.1 ABK74729.1 ABK73354.1 ABK73354.1 ABK75115.1 ABK75115.1 ABK73118.1 ABK73118.1 ABK76032.1 ABK76032.1 ABK70539.1 ABK70539.1 ABK73311.1 ABK73311.1 ABK75772.1 ABK75772.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71912.1Conserved hypothetical protein. (454 aa)    
Predicted Functional Partners:
uppS-2
Undecaprenyl diphosphate synthase; Catalyzes the condensation of only one isopentenyl pyrophosphate (IPP) unit in the cis configuration to E-geranyl diphosphate (E-GPP) generating the 15 carbon product (2Z,6E)-farnesyl diphosphate (Z-FPP or EZ-FPP). Z-FPP is the precursor of decaprenyl diphosphate, which has a central role in the biosynthesis of the mycobacterial cell wall.
       0.871
ABK69649.1
Conserved hypothetical protein.
  
    0.717
ABK74729.1
Channel protein, hemolysin III family protein; Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065.
       0.715
ABK73354.1
Conserved hypothetical protein.
  
     0.684
ABK75115.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
    0.657
ABK73118.1
Conserved hypothetical protein.
  
    0.650
ABK76032.1
Conserved hypothetical protein.
  
     0.624
ABK70539.1
Conserved hypothetical protein.
  
     0.607
ABK73311.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
    0.600
ABK75772.1
Conserved hypothetical protein.
  
     0.586
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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