Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69867.1 | ABK74219.1 | MSMEG_2888 | MSMEG_5271 | Lipase; Identified by match to protein family HMM PF07859. | Esterase; Identified by match to protein family HMM PF07859. | 0.787 |
ABK70226.1 | ABK72008.1 | MSMEG_0289 | MSMEG_6852 | Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859. | Putative carboxylesterase/lipase; Identified by match to protein family HMM PF07859. | 0.599 |
ABK70226.1 | ABK74219.1 | MSMEG_0289 | MSMEG_5271 | Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859. | Esterase; Identified by match to protein family HMM PF07859. | 0.695 |
ABK70636.1 | ABK74219.1 | MSMEG_4148 | MSMEG_5271 | Lipase; Identified by match to protein family HMM PF07859. | Esterase; Identified by match to protein family HMM PF07859. | 0.788 |
ABK71957.1 | ABK72429.1 | MSMEG_4773 | MSMEG_2074 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.904 |
ABK71957.1 | ABK72981.1 | MSMEG_4773 | MSMEG_2232 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.940 |
ABK71957.1 | ABK74219.1 | MSMEG_4773 | MSMEG_5271 | Identified by match to protein family HMM PF04909. | Esterase; Identified by match to protein family HMM PF07859. | 0.835 |
ABK71957.1 | ABK75057.1 | MSMEG_4773 | MSMEG_1308 | Identified by match to protein family HMM PF04909. | Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. | 0.820 |
ABK71957.1 | lipP | MSMEG_4773 | MSMEG_4680 | Identified by match to protein family HMM PF04909. | Carboxylesterase, putative; Identified by similarity to PIR:JC2091; match to protein family HMM PF00144. | 0.823 |
ABK72008.1 | ABK70226.1 | MSMEG_6852 | MSMEG_0289 | Putative carboxylesterase/lipase; Identified by match to protein family HMM PF07859. | Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859. | 0.599 |
ABK72008.1 | ABK74219.1 | MSMEG_6852 | MSMEG_5271 | Putative carboxylesterase/lipase; Identified by match to protein family HMM PF07859. | Esterase; Identified by match to protein family HMM PF07859. | 0.783 |
ABK72429.1 | ABK71957.1 | MSMEG_2074 | MSMEG_4773 | Conserved hypothetical protein. | Identified by match to protein family HMM PF04909. | 0.904 |
ABK72429.1 | ABK72981.1 | MSMEG_2074 | MSMEG_2232 | Conserved hypothetical protein. | Identified by match to protein family HMM PF04909. | 0.904 |
ABK72429.1 | ABK74219.1 | MSMEG_2074 | MSMEG_5271 | Conserved hypothetical protein. | Esterase; Identified by match to protein family HMM PF07859. | 0.834 |
ABK72429.1 | ABK75057.1 | MSMEG_2074 | MSMEG_1308 | Conserved hypothetical protein. | Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. | 0.820 |
ABK72429.1 | lipP | MSMEG_2074 | MSMEG_4680 | Conserved hypothetical protein. | Carboxylesterase, putative; Identified by similarity to PIR:JC2091; match to protein family HMM PF00144. | 0.829 |
ABK72981.1 | ABK71957.1 | MSMEG_2232 | MSMEG_4773 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.940 |
ABK72981.1 | ABK72429.1 | MSMEG_2232 | MSMEG_2074 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.904 |
ABK72981.1 | ABK74219.1 | MSMEG_2232 | MSMEG_5271 | Identified by match to protein family HMM PF04909. | Esterase; Identified by match to protein family HMM PF07859. | 0.832 |
ABK72981.1 | ABK75057.1 | MSMEG_2232 | MSMEG_1308 | Identified by match to protein family HMM PF04909. | Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. | 0.822 |
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