STRINGSTRING
ABK71135.1 ABK71135.1 ABK71737.1 ABK71737.1 ABK73105.1 ABK73105.1 ABK71067.1 ABK71067.1 ABK75153.1 ABK75153.1 ABK70936.1 ABK70936.1 ABK70882.1 ABK70882.1 ABK75502.1 ABK75502.1 ABK74109.1 ABK74109.1 ABK73301.1 ABK73301.1 ABK72473.1 ABK72473.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71135.1Cysteine dioxygenase type I superfamily protein; Identified by match to protein family HMM PF05995. (182 aa)    
Predicted Functional Partners:
ABK71737.1
Conserved hypothetical protein.
    0.968
ABK73105.1
Conserved hypothetical protein.
  
    0.650
ABK71067.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.623
ABK75153.1
Conserved hypothetical protein.
 
     0.587
ABK70936.1
Conserved hypothetical protein.
 
     0.587
ABK70882.1
SseC protein; Identified by match to protein family HMM PF07210.
  
     0.584
ABK75502.1
LpqV protein.
       0.578
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
  
     0.549
ABK73301.1
Conserved hypothetical protein.
  
     0.529
ABK72473.1
Integral membrane protein; Identified by match to protein family HMM PF01435; match to protein family HMM PF05569.
  
    0.510
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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