STRINGSTRING
ABK72577.1 ABK72577.1 ABK75805.1 ABK75805.1 ABK72137.1 ABK72137.1 ABK69809.1 ABK69809.1 lipB lipB ABK69747.1 ABK69747.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72577.1Patatin; Identified by match to protein family HMM PF01734. (340 aa)    
Predicted Functional Partners:
ABK75805.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; Identified by match to protein family HMM PF00082.
  
  
 0.824
ABK72137.1
Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976.
 
     0.808
ABK69809.1
Proline imino-peptidase; Identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250; Belongs to the peptidase S33 family.
  
  
 0.616
lipB
Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
   
  
 0.557
ABK69747.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
     
 0.550
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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