STRINGSTRING
ABK70253.1 ABK70253.1 ABK72110.1 ABK72110.1 ABK70933.1 ABK70933.1 ABK75811.1 ABK75811.1 ABK76084.1 ABK76084.1 ABK73554.1 ABK73554.1 ABK71734.1 ABK71734.1 ABK71500.1 ABK71500.1 ABK69648.1 ABK69648.1 ABK72979.1 ABK72979.1 ABK76052.1 ABK76052.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70253.1Conserved hypothetical protein. (242 aa)    
Predicted Functional Partners:
ABK72110.1
Conserved hypothetical protein.
 
    0.833
ABK70933.1
SAM-dependent methyltransferase.
 
    0.831
ABK75811.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.804
ABK76084.1
ABC-type multidrug transport system ATPase component; Identified by match to protein family HMM PF00005.
  
    0.793
ABK73554.1
Gp15 protein.
  
    0.683
ABK71734.1
Rmt2 protein.
  
     0.629
ABK71500.1
Conserved hypothetical protein.
 
    0.580
ABK69648.1
Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
   
  
 0.572
ABK72979.1
Identified by match to protein family HMM PF01022.
   
    0.552
ABK76052.1
Identified by match to protein family HMM TIGR01409.
 
     0.535
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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