Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70253.1 | ABK70933.1 | MSMEG_5309 | MSMEG_5310 | Conserved hypothetical protein. | SAM-dependent methyltransferase. | 0.831 |
ABK70253.1 | ABK71500.1 | MSMEG_5309 | MSMEG_5314 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.580 |
ABK70253.1 | ABK72110.1 | MSMEG_5309 | MSMEG_5311 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.833 |
ABK70253.1 | ABK75811.1 | MSMEG_5309 | MSMEG_5313 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.804 |
ABK70253.1 | ABK76084.1 | MSMEG_5309 | MSMEG_5312 | Conserved hypothetical protein. | ABC-type multidrug transport system ATPase component; Identified by match to protein family HMM PF00005. | 0.793 |
ABK70933.1 | ABK70253.1 | MSMEG_5310 | MSMEG_5309 | SAM-dependent methyltransferase. | Conserved hypothetical protein. | 0.831 |
ABK70933.1 | ABK71500.1 | MSMEG_5310 | MSMEG_5314 | SAM-dependent methyltransferase. | Conserved hypothetical protein. | 0.503 |
ABK70933.1 | ABK71528.1 | MSMEG_5310 | MSMEG_2686 | SAM-dependent methyltransferase. | Conserved hypothetical protein. | 0.497 |
ABK70933.1 | ABK72110.1 | MSMEG_5310 | MSMEG_5311 | SAM-dependent methyltransferase. | Conserved hypothetical protein. | 0.850 |
ABK70933.1 | ABK75219.1 | MSMEG_5310 | MSMEG_1125 | SAM-dependent methyltransferase. | Regulatory protein, ArsR; Identified by match to protein family HMM PF01726. | 0.461 |
ABK70933.1 | ABK75811.1 | MSMEG_5310 | MSMEG_5313 | SAM-dependent methyltransferase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.826 |
ABK70933.1 | ABK76084.1 | MSMEG_5310 | MSMEG_5312 | SAM-dependent methyltransferase. | ABC-type multidrug transport system ATPase component; Identified by match to protein family HMM PF00005. | 0.795 |
ABK71500.1 | ABK70253.1 | MSMEG_5314 | MSMEG_5309 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.580 |
ABK71500.1 | ABK70933.1 | MSMEG_5314 | MSMEG_5310 | Conserved hypothetical protein. | SAM-dependent methyltransferase. | 0.503 |
ABK71500.1 | ABK72110.1 | MSMEG_5314 | MSMEG_5311 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.505 |
ABK71500.1 | ABK75811.1 | MSMEG_5314 | MSMEG_5313 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.505 |
ABK71500.1 | ABK76084.1 | MSMEG_5314 | MSMEG_5312 | Conserved hypothetical protein. | ABC-type multidrug transport system ATPase component; Identified by match to protein family HMM PF00005. | 0.509 |
ABK71528.1 | ABK70933.1 | MSMEG_2686 | MSMEG_5310 | Conserved hypothetical protein. | SAM-dependent methyltransferase. | 0.497 |
ABK71528.1 | ABK75219.1 | MSMEG_2686 | MSMEG_1125 | Conserved hypothetical protein. | Regulatory protein, ArsR; Identified by match to protein family HMM PF01726. | 0.642 |
ABK72110.1 | ABK70253.1 | MSMEG_5311 | MSMEG_5309 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.833 |
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