STRINGSTRING
ABK72110.1 ABK72110.1 ABK70933.1 ABK70933.1 ABK70253.1 ABK70253.1 ABK75811.1 ABK75811.1 ABK76084.1 ABK76084.1 ABK72581.1 ABK72581.1 aftC aftC ABK70327.1 ABK70327.1 ABK70238.1 ABK70238.1 ABK70333.1 ABK70333.1 ABK73967.1 ABK73967.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72110.1Conserved hypothetical protein. (259 aa)    
Predicted Functional Partners:
ABK70933.1
SAM-dependent methyltransferase.
 
    0.850
ABK70253.1
Conserved hypothetical protein.
 
    0.833
ABK75811.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.832
ABK76084.1
ABC-type multidrug transport system ATPase component; Identified by match to protein family HMM PF00005.
  
    0.802
ABK72581.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.680
aftC
Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
  
     0.674
ABK70327.1
Conserved hypothetical protein.
  
     0.658
ABK70238.1
Lipoprotein, putative.
  
     0.635
ABK70333.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.628
ABK73967.1
Probable conserved membrane protein; Identified by match to protein family HMM PF05108.
  
    0.622
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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