Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69846.1 | ABK72492.1 | MSMEG_6433 | MSMEG_6412 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.686 |
ABK69846.1 | ABK72792.1 | MSMEG_6433 | MSMEG_5315 | Hypothetical protein; Identified by Glimmer2; putative. | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | 0.621 |
ABK69846.1 | ABK73058.1 | MSMEG_6433 | MSMEG_3062 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.570 |
ABK69846.1 | ABK73554.1 | MSMEG_6433 | MSMEG_2146 | Hypothetical protein; Identified by Glimmer2; putative. | Gp15 protein. | 0.742 |
ABK69846.1 | ABK74255.1 | MSMEG_6433 | MSMEG_5412 | Hypothetical protein; Identified by Glimmer2; putative. | Immunogenic protein MPT63. | 0.754 |
ABK71500.1 | ABK72792.1 | MSMEG_5314 | MSMEG_5315 | Conserved hypothetical protein. | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | 0.578 |
ABK71860.1 | ABK72323.1 | MSMEG_6281 | MSMEG_6935 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | 0.989 |
ABK71860.1 | ABK72792.1 | MSMEG_6281 | MSMEG_5315 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | 0.892 |
ABK71860.1 | ABK75413.1 | MSMEG_6281 | MSMEG_6406 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.900 |
ABK71947.1 | ABK72792.1 | MSMEG_5317 | MSMEG_5315 | Conserved hypothetical protein. | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | 0.571 |
ABK72323.1 | ABK71860.1 | MSMEG_6935 | MSMEG_6281 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.989 |
ABK72323.1 | ABK72792.1 | MSMEG_6935 | MSMEG_5315 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | 0.896 |
ABK72323.1 | ABK75413.1 | MSMEG_6935 | MSMEG_6406 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.870 |
ABK72492.1 | ABK69846.1 | MSMEG_6412 | MSMEG_6433 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.686 |
ABK72492.1 | ABK72792.1 | MSMEG_6412 | MSMEG_5315 | Conserved hypothetical protein. | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | 0.562 |
ABK72492.1 | ABK73554.1 | MSMEG_6412 | MSMEG_2146 | Conserved hypothetical protein. | Gp15 protein. | 0.651 |
ABK72492.1 | ABK74255.1 | MSMEG_6412 | MSMEG_5412 | Conserved hypothetical protein. | Immunogenic protein MPT63. | 0.695 |
ABK72792.1 | ABK69846.1 | MSMEG_5315 | MSMEG_6433 | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | Hypothetical protein; Identified by Glimmer2; putative. | 0.621 |
ABK72792.1 | ABK71500.1 | MSMEG_5315 | MSMEG_5314 | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | Conserved hypothetical protein. | 0.578 |
ABK72792.1 | ABK71860.1 | MSMEG_5315 | MSMEG_6281 | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.892 |
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