Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71636.1 | ABK72351.1 | MSMEG_5343 | MSMEG_5345 | Conserved hypothetical protein. | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | 0.550 |
ABK71636.1 | ABK73449.1 | MSMEG_5343 | MSMEG_5344 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.597 |
ABK71636.1 | ABK75174.1 | MSMEG_5343 | MSMEG_5342 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.779 |
ABK72351.1 | ABK71636.1 | MSMEG_5345 | MSMEG_5343 | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | Conserved hypothetical protein. | 0.550 |
ABK72351.1 | ABK73449.1 | MSMEG_5345 | MSMEG_5344 | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | Hypothetical protein; Identified by Glimmer2; putative. | 0.555 |
ABK72351.1 | ABK75174.1 | MSMEG_5345 | MSMEG_5342 | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | Conserved hypothetical protein. | 0.442 |
ABK72773.1 | ABK75174.1 | MSMEG_1772 | MSMEG_5342 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.403 |
ABK73449.1 | ABK71636.1 | MSMEG_5344 | MSMEG_5343 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.597 |
ABK73449.1 | ABK72351.1 | MSMEG_5344 | MSMEG_5345 | Hypothetical protein; Identified by Glimmer2; putative. | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | 0.555 |
ABK73449.1 | ABK75174.1 | MSMEG_5344 | MSMEG_5342 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.595 |
ABK75174.1 | ABK71636.1 | MSMEG_5342 | MSMEG_5343 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.779 |
ABK75174.1 | ABK72351.1 | MSMEG_5342 | MSMEG_5345 | Conserved hypothetical protein. | Glycosyl hydrolases family protein 16; Identified by match to protein family HMM PF00722. | 0.442 |
ABK75174.1 | ABK72773.1 | MSMEG_5342 | MSMEG_1772 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.403 |
ABK75174.1 | ABK73449.1 | MSMEG_5342 | MSMEG_5344 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.595 |