STRINGSTRING
ABK73373.1 ABK73373.1 ABK72162.1 ABK72162.1 ABK74905.1 ABK74905.1 ABK74565.1 ABK74565.1 cynS cynS ABK74843.1 ABK74843.1 TynA TynA ABK75630.1 ABK75630.1 ABK71217.1 ABK71217.1 ABK73308.1 ABK73308.1 ABK72636.1 ABK72636.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73373.1Identified by match to protein family HMM PF03069; match to protein family HMM TIGR01409. (452 aa)    
Predicted Functional Partners:
ABK72162.1
Sodium:dicarboxylate symporter; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.768
ABK74905.1
Transport gene; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
   
  
 0.754
ABK74565.1
Conserved hypothetical protein.
   
  
 0.690
cynS
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
 
  
 0.642
ABK74843.1
Formate/nitrate transporter; Identified by match to protein family HMM PF01226.
 
    0.613
TynA
Copper methylamine oxidase; Identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728.
  
  
 0.557
ABK75630.1
Putative periplasmic binding protein; Identified by match to protein family HMM PF01094.
  
  
 0.553
ABK71217.1
Amino acid permease; Identified by match to protein family HMM PF00324.
  
  
 0.543
ABK73308.1
Molybdopterin oxidoreductase; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.543
ABK72636.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
  
 0.526
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (14%) [HD]