STRINGSTRING
ABK74892.1 ABK74892.1 ABK69696.1 ABK69696.1 ABK75667.1 ABK75667.1 ABK71735.1 ABK71735.1 ABK69682.1 ABK69682.1 pheT pheT ABK69677.1 ABK69677.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74892.1Conserved hypothetical protein; Identified by match to protein family HMM PF01925. (290 aa)    
Predicted Functional Partners:
ABK69696.1
Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.
 
  
 0.960
ABK75667.1
Identified by match to protein family HMM PF00581; match to protein family HMM PF00753.
 
  
 0.922
ABK71735.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02583.
 
  
 0.876
ABK69682.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03625.
       0.601
pheT
phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.478
ABK69677.1
Molybdopterin biosynthesis protein MoeB; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.
  
  
 0.450
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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