Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70589.1 | cadA | MSMEG_4486 | MSMEG_5403 | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | 0.501 |
| ABK71026.1 | cadA | MSMEG_6509 | MSMEG_5403 | ABC-type drug export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | 0.538 |
| ABK71026.1 | ctpE | MSMEG_6509 | MSMEG_5636 | ABC-type drug export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | P-type ATPase - metal cation transport; P-type ATPase involved in specific uptake of calcium. Essential for growth and maintenance of cell surface integrity under Ca(2+)-deficient conditions. | 0.442 |
| ABK71436.1 | ABK72906.1 | MSMEG_0750 | MSMEG_0755 | Membrane protein. | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | 0.446 |
| ABK71436.1 | cadA | MSMEG_0750 | MSMEG_5403 | Membrane protein. | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | 0.600 |
| ABK72888.1 | ABK72906.1 | MSMEG_5016 | MSMEG_0755 | Conserved domain protein; Identified by match to protein family HMM PF00403. | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | 0.587 |
| ABK72888.1 | cadA | MSMEG_5016 | MSMEG_5403 | Conserved domain protein; Identified by match to protein family HMM PF00403. | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | 0.882 |
| ABK72888.1 | sodC | MSMEG_5016 | MSMEG_0835 | Conserved domain protein; Identified by match to protein family HMM PF00403. | Copper/zinc superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.987 |
| ABK72906.1 | ABK71436.1 | MSMEG_0755 | MSMEG_0750 | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | Membrane protein. | 0.446 |
| ABK72906.1 | ABK72888.1 | MSMEG_0755 | MSMEG_5016 | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | Conserved domain protein; Identified by match to protein family HMM PF00403. | 0.587 |
| ABK72906.1 | cadA | MSMEG_0755 | MSMEG_5403 | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | 0.537 |
| ABK72906.1 | ctpE | MSMEG_0755 | MSMEG_5636 | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | P-type ATPase - metal cation transport; P-type ATPase involved in specific uptake of calcium. Essential for growth and maintenance of cell surface integrity under Ca(2+)-deficient conditions. | 0.549 |
| ABK74383.1 | cadA | MSMEG_5405 | MSMEG_5403 | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | 0.872 |
| cadA | ABK70589.1 | MSMEG_5403 | MSMEG_4486 | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. | 0.501 |
| cadA | ABK71026.1 | MSMEG_5403 | MSMEG_6509 | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | ABC-type drug export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.538 |
| cadA | ABK71436.1 | MSMEG_5403 | MSMEG_0750 | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | Membrane protein. | 0.600 |
| cadA | ABK72888.1 | MSMEG_5403 | MSMEG_5016 | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | Conserved domain protein; Identified by match to protein family HMM PF00403. | 0.882 |
| cadA | ABK72906.1 | MSMEG_5403 | MSMEG_0755 | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | 0.537 |
| cadA | ABK74383.1 | MSMEG_5403 | MSMEG_5405 | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. | 0.872 |
| cadA | cbiM | MSMEG_5403 | MSMEG_2607 | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891. | 0.558 |
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