Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70266.1 | ABK74255.1 | MSMEG_5409 | MSMEG_5412 | Conserved hypothetical protein. | Immunogenic protein MPT63. | 0.500 |
ABK70266.1 | ABK74619.1 | MSMEG_5409 | MSMEG_5410 | Conserved hypothetical protein. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.896 |
ABK70266.1 | ABK75533.1 | MSMEG_5409 | MSMEG_5411 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.803 |
ABK70266.1 | lgt | MSMEG_5409 | MSMEG_5408 | Conserved hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.474 |
ABK74255.1 | ABK70266.1 | MSMEG_5412 | MSMEG_5409 | Immunogenic protein MPT63. | Conserved hypothetical protein. | 0.500 |
ABK74255.1 | ABK74619.1 | MSMEG_5412 | MSMEG_5410 | Immunogenic protein MPT63. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.500 |
ABK74255.1 | ABK75533.1 | MSMEG_5412 | MSMEG_5411 | Immunogenic protein MPT63. | Conserved hypothetical protein. | 0.500 |
ABK74619.1 | ABK70266.1 | MSMEG_5410 | MSMEG_5409 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Conserved hypothetical protein. | 0.896 |
ABK74619.1 | ABK74255.1 | MSMEG_5410 | MSMEG_5412 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Immunogenic protein MPT63. | 0.500 |
ABK74619.1 | ABK75533.1 | MSMEG_5410 | MSMEG_5411 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Conserved hypothetical protein. | 0.816 |
ABK74619.1 | lgt | MSMEG_5410 | MSMEG_5408 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.858 |
ABK75533.1 | ABK70266.1 | MSMEG_5411 | MSMEG_5409 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.803 |
ABK75533.1 | ABK74255.1 | MSMEG_5411 | MSMEG_5412 | Conserved hypothetical protein. | Immunogenic protein MPT63. | 0.500 |
ABK75533.1 | ABK74619.1 | MSMEG_5411 | MSMEG_5410 | Conserved hypothetical protein. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.816 |
ABK75533.1 | lgt | MSMEG_5411 | MSMEG_5408 | Conserved hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.450 |
lgt | ABK70266.1 | MSMEG_5408 | MSMEG_5409 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Conserved hypothetical protein. | 0.474 |
lgt | ABK74619.1 | MSMEG_5408 | MSMEG_5410 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.858 |
lgt | ABK75533.1 | MSMEG_5408 | MSMEG_5411 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Conserved hypothetical protein. | 0.450 |