Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69846.1 | ABK71502.1 | MSMEG_6433 | MSMEG_6231 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.631 |
ABK69846.1 | ABK73058.1 | MSMEG_6433 | MSMEG_3062 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.570 |
ABK69846.1 | ABK74255.1 | MSMEG_6433 | MSMEG_5412 | Hypothetical protein; Identified by Glimmer2; putative. | Immunogenic protein MPT63. | 0.754 |
ABK69846.1 | ABK74862.1 | MSMEG_6433 | MSMEG_1188 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.551 |
ABK69846.1 | ABK76032.1 | MSMEG_6433 | MSMEG_1195 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.607 |
ABK69846.1 | snm | MSMEG_6433 | MSMEG_0623 | Hypothetical protein; Identified by Glimmer2; putative. | Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family. | 0.427 |
ABK71169.1 | ABK71502.1 | MSMEG_3490 | MSMEG_6231 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Conserved hypothetical protein. | 0.580 |
ABK71169.1 | ABK74136.1 | MSMEG_3490 | MSMEG_6405 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Erp protein. | 0.509 |
ABK71169.1 | ABK74255.1 | MSMEG_3490 | MSMEG_5412 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Immunogenic protein MPT63. | 0.730 |
ABK71169.1 | ABK75545.1 | MSMEG_3490 | MSMEG_3531 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Conserved hypothetical protein. | 0.658 |
ABK71169.1 | ABK75765.1 | MSMEG_3490 | MSMEG_2696 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Putative conserved membrane alanine rich protein. | 0.422 |
ABK71502.1 | ABK69846.1 | MSMEG_6231 | MSMEG_6433 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.631 |
ABK71502.1 | ABK71169.1 | MSMEG_6231 | MSMEG_3490 | Conserved hypothetical protein. | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | 0.580 |
ABK71502.1 | ABK74255.1 | MSMEG_6231 | MSMEG_5412 | Conserved hypothetical protein. | Immunogenic protein MPT63. | 0.741 |
ABK71502.1 | ABK74862.1 | MSMEG_6231 | MSMEG_1188 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.447 |
ABK71502.1 | ABK75545.1 | MSMEG_6231 | MSMEG_3531 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.736 |
ABK71502.1 | ABK76032.1 | MSMEG_6231 | MSMEG_1195 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.511 |
ABK71502.1 | snm | MSMEG_6231 | MSMEG_0623 | Conserved hypothetical protein. | Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family. | 0.561 |
ABK73058.1 | ABK69846.1 | MSMEG_3062 | MSMEG_6433 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.570 |
ABK73058.1 | ABK74255.1 | MSMEG_3062 | MSMEG_5412 | Conserved hypothetical protein. | Immunogenic protein MPT63. | 0.716 |
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