STRINGSTRING
ABK70056.1 ABK70056.1 ABK73295.1 ABK73295.1 ABK74021.1 ABK74021.1 ABK73170.1 ABK73170.1 ABK75599.1 ABK75599.1 rne rne ABK75772.1 ABK75772.1 ABK71831.1 ABK71831.1 ABK71306.1 ABK71306.1 ABK72424.1 ABK72424.1 ABK74613.1 ABK74613.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70056.1Hypothetical protein; Identified by Glimmer2; putative. (976 aa)    
Predicted Functional Partners:
ABK73295.1
Conserved hypothetical protein.
  
  
 0.708
ABK74021.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04324.
  
  
 0.461
ABK73170.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.443
ABK75599.1
Conserved hypothetical protein.
  
    0.440
rne
Ribonuclease, Rne/Rng family protein; Endoribonuclease that plays a central role in RNA processing and decay. Plays a major role in pre-16S rRNA maturation, probably generating the mature 5'-end, and a minor role in pre-5S and pre-23S rRNA maturation.
  
  
 0.432
ABK75772.1
Conserved hypothetical protein.
  
  
 0.429
ABK71831.1
Conserved hypothetical protein.
  
 
 0.414
ABK71306.1
Conserved hypothetical protein.
  
 
 0.413
ABK72424.1
Conserved hypothetical protein.
  
 
 0.411
ABK74613.1
56kDa selenium binding protein; Identified by match to protein family HMM PF05694.
  
    0.404
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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