Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70335.1 | ABK75619.1 | MSMEG_3397 | MSMEG_2491 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | 0.921 |
| ABK70335.1 | arcA | MSMEG_3397 | MSMEG_1409 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.914 |
| ABK70335.1 | arcA-2 | MSMEG_3397 | MSMEG_5448 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Arginine deiminase; Identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.914 |
| ABK70335.1 | argF | MSMEG_3397 | MSMEG_3772 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.917 |
| ABK70335.1 | argG | MSMEG_3397 | MSMEG_3770 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.946 |
| ABK75092.1 | arcA | MSMEG_0266 | MSMEG_1409 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.837 |
| ABK75092.1 | arcA-2 | MSMEG_0266 | MSMEG_5448 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Arginine deiminase; Identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.838 |
| ABK75092.1 | argF | MSMEG_0266 | MSMEG_3772 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.427 |
| ABK75092.1 | argH | MSMEG_0266 | MSMEG_3769 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838. | 0.827 |
| ABK75092.1 | speB | MSMEG_0266 | MSMEG_1072 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.918 |
| ABK75092.1 | speB-2 | MSMEG_0266 | MSMEG_3535 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.640 |
| ABK75092.1 | speB-3 | MSMEG_0266 | MSMEG_4374 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.918 |
| ABK75619.1 | ABK70335.1 | MSMEG_2491 | MSMEG_3397 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | 0.921 |
| ABK75619.1 | arcA | MSMEG_2491 | MSMEG_1409 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.914 |
| ABK75619.1 | arcA-2 | MSMEG_2491 | MSMEG_5448 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Arginine deiminase; Identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.925 |
| ABK75619.1 | argF | MSMEG_2491 | MSMEG_3772 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.917 |
| ABK75619.1 | argG | MSMEG_2491 | MSMEG_3770 | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.946 |
| arcA | ABK70335.1 | MSMEG_1409 | MSMEG_3397 | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | 0.914 |
| arcA | ABK75092.1 | MSMEG_1409 | MSMEG_0266 | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | 0.837 |
| arcA | ABK75619.1 | MSMEG_1409 | MSMEG_2491 | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | Acetylornithine deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. | 0.914 |
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