Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71094.1 | ABK71602.1 | MSMEG_1823 | MSMEG_3952 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Conserved hypothetical protein. | 0.423 |
ABK71094.1 | ABK74559.1 | MSMEG_1823 | MSMEG_5449 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Conserved hypothetical protein. | 0.419 |
ABK71094.1 | ABK74735.1 | MSMEG_1823 | MSMEG_5246 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Conserved hypothetical protein. | 0.414 |
ABK71591.1 | ABK74559.1 | MSMEG_0438 | MSMEG_5449 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | Conserved hypothetical protein. | 0.423 |
ABK71602.1 | ABK71094.1 | MSMEG_3952 | MSMEG_1823 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 0.423 |
ABK71602.1 | ABK74559.1 | MSMEG_3952 | MSMEG_5449 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.408 |
ABK72177.1 | ABK74559.1 | MSMEG_5447 | MSMEG_5449 | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | Conserved hypothetical protein. | 0.607 |
ABK72177.1 | rsmI | MSMEG_5447 | MSMEG_5445 | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.798 |
ABK74559.1 | ABK71094.1 | MSMEG_5449 | MSMEG_1823 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 0.419 |
ABK74559.1 | ABK71591.1 | MSMEG_5449 | MSMEG_0438 | Conserved hypothetical protein. | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | 0.423 |
ABK74559.1 | ABK71602.1 | MSMEG_5449 | MSMEG_3952 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.408 |
ABK74559.1 | ABK72177.1 | MSMEG_5449 | MSMEG_5447 | Conserved hypothetical protein. | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | 0.607 |
ABK74559.1 | ABK74735.1 | MSMEG_5449 | MSMEG_5246 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.435 |
ABK74559.1 | ABK74758.1 | MSMEG_5449 | MSMEG_3683 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.470 |
ABK74559.1 | rsmI | MSMEG_5449 | MSMEG_5445 | Conserved hypothetical protein. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.433 |
ABK74735.1 | ABK71094.1 | MSMEG_5246 | MSMEG_1823 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 0.414 |
ABK74735.1 | ABK74559.1 | MSMEG_5246 | MSMEG_5449 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.435 |
ABK74758.1 | ABK74559.1 | MSMEG_3683 | MSMEG_5449 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.470 |
rsmI | ABK72177.1 | MSMEG_5445 | MSMEG_5447 | Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | 0.798 |
rsmI | ABK74559.1 | MSMEG_5445 | MSMEG_5449 | Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Conserved hypothetical protein. | 0.433 |