STRINGSTRING
ABK70878.1 ABK70878.1 ABK73122.1 ABK73122.1 ABK69607.1 ABK69607.1 rarD-2 rarD-2 ABK70798.1 ABK70798.1 ABK70042.1 ABK70042.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK70878.1Integral membrane transport protein; Identified by match to protein family HMM PF07690. (385 aa)    
Predicted Functional Partners:
ABK73122.1
6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF03446.
  
    0.777
ABK69607.1
Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
       0.732
rarD-2
RarD protein; Identified by match to protein family HMM TIGR00688.
  
    0.623
ABK70798.1
DNA-binding protein.
 
 
 0.418
ABK70042.1
Conserved hypothetical protein.
  
    0.405
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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