Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69607.1 | ABK70878.1 | MSMEG_5466 | MSMEG_5464 | Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.732 |
ABK69607.1 | ABK73122.1 | MSMEG_5466 | MSMEG_5463 | Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF03446. | 0.750 |
ABK69607.1 | rarD-2 | MSMEG_5466 | MSMEG_5462 | Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | RarD protein; Identified by match to protein family HMM TIGR00688. | 0.594 |
ABK70042.1 | ABK70878.1 | MSMEG_2589 | MSMEG_5464 | Conserved hypothetical protein. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.405 |
ABK70798.1 | ABK70878.1 | MSMEG_3449 | MSMEG_5464 | DNA-binding protein. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.418 |
ABK70878.1 | ABK69607.1 | MSMEG_5464 | MSMEG_5466 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 0.732 |
ABK70878.1 | ABK70042.1 | MSMEG_5464 | MSMEG_2589 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | Conserved hypothetical protein. | 0.405 |
ABK70878.1 | ABK70798.1 | MSMEG_5464 | MSMEG_3449 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | DNA-binding protein. | 0.418 |
ABK70878.1 | ABK73122.1 | MSMEG_5464 | MSMEG_5463 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF03446. | 0.777 |
ABK70878.1 | rarD-2 | MSMEG_5464 | MSMEG_5462 | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | RarD protein; Identified by match to protein family HMM TIGR00688. | 0.623 |
ABK73122.1 | ABK69607.1 | MSMEG_5463 | MSMEG_5466 | 6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF03446. | Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 0.750 |
ABK73122.1 | ABK70878.1 | MSMEG_5463 | MSMEG_5464 | 6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF03446. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.777 |
ABK73122.1 | rarD-2 | MSMEG_5463 | MSMEG_5462 | 6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF03446. | RarD protein; Identified by match to protein family HMM TIGR00688. | 0.617 |
rarD-2 | ABK69607.1 | MSMEG_5462 | MSMEG_5466 | RarD protein; Identified by match to protein family HMM TIGR00688. | Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 0.594 |
rarD-2 | ABK70878.1 | MSMEG_5462 | MSMEG_5464 | RarD protein; Identified by match to protein family HMM TIGR00688. | Integral membrane transport protein; Identified by match to protein family HMM PF07690. | 0.623 |
rarD-2 | ABK73122.1 | MSMEG_5462 | MSMEG_5463 | RarD protein; Identified by match to protein family HMM TIGR00688. | 6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF03446. | 0.617 |