STRINGSTRING
ABK69607.1 ABK69607.1 ABK74744.1 ABK74744.1 ABK70443.1 ABK70443.1 ABK75298.1 ABK75298.1 ABK73122.1 ABK73122.1 ABK70103.1 ABK70103.1 ABK75326.1 ABK75326.1 ABK70878.1 ABK70878.1 ABK72561.1 ABK72561.1 ABK69795.1 ABK69795.1 ABK69836.1 ABK69836.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69607.1Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. (241 aa)    
Predicted Functional Partners:
ABK74744.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
 
   0.780
ABK70443.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
  
     0.753
ABK75298.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.753
ABK73122.1
6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF03446.
  
  
 0.750
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.742
ABK75326.1
D-beta-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
    0.740
ABK70878.1
Integral membrane transport protein; Identified by match to protein family HMM PF07690.
       0.732
ABK72561.1
3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106.
  
     0.696
ABK69795.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106.
  
    0.645
ABK69836.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
  
    0.615
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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