STRINGSTRING
ABK69770.1 ABK69770.1 ABK70087.1 ABK70087.1 ABK71136.1 ABK71136.1 ABK70205.1 ABK70205.1 ABK74374.1 ABK74374.1 ABK72440.1 ABK72440.1 ABK72547.1 ABK72547.1 ABK70374.1 ABK70374.1 galU galU ABK69895.1 ABK69895.1 ABK76120.1 ABK76120.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69770.1Transporter; Identified by match to protein family HMM PF00324. (608 aa)    
Predicted Functional Partners:
ABK70087.1
Identified by match to protein family HMM PF00582.
 
    0.864
ABK71136.1
Amino acid permease family protein, putative; Identified by match to protein family HMM PF00324.
 
  
 0.607
ABK70205.1
Amino acid permease, putative; Identified by match to protein family HMM PF00324.
 
  
 0.594
ABK74374.1
L-asparaginase; Identified by match to protein family HMM PF00710.
  
  
 0.572
ABK72440.1
Amino acid transporter; Identified by match to protein family HMM PF00324.
 
  
 0.558
ABK72547.1
5,10-methenyltetrahydrofolate synthetase; Involved in the removal of 5-formyltetrahydrofolate. In vitro, it is a potent inhibitor of various folate-dependent enzymes in the C1 metabolism network and in vivo it might function as a folate storage. 5-formyltetrahydrofolate is also used as an antifolate rescue agent in cancer chemotherapy. Catalyzes the irreversible ATP-dependent transformation of 5-formyltetrahydrofolate (5-CHO-THF) to form 5,10- methenyltetrahydrofolate (5,10-CH=THF). The reverse reaction is catalyzed by the serine hydroxymethyltransferase GlyA (SHMT).
       0.517
ABK70374.1
Amino acid permease; Identified by match to protein family HMM PF00324.
 
  
 0.479
galU
UTP-glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF00483.
  
  
 0.418
ABK69895.1
Amino acid permease-associated region; Identified by match to protein family HMM PF00324.
 
  
 0.417
ABK76120.1
Amino acid permease-associated region, putative; Identified by match to protein family HMM PF00324.
 
  
 0.411
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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