Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69539.1 | ABK70087.1 | MSMEG_1625 | MSMEG_5474 | Amino acid transporter, putative; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF00582. | 0.661 |
| ABK69539.1 | ABK75021.1 | MSMEG_1625 | MSMEG_6688 | Amino acid transporter, putative; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF07905. | 0.627 |
| ABK69539.1 | ABK75624.1 | MSMEG_1625 | MSMEG_0579 | Amino acid transporter, putative; Identified by match to protein family HMM PF00324. | Helix-turn-helix, Fis-type; Identified by match to protein family HMM PF02954; match to protein family HMM PF07905. | 0.530 |
| ABK69770.1 | ABK70087.1 | MSMEG_5473 | MSMEG_5474 | Transporter; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF00582. | 0.864 |
| ABK70087.1 | ABK69539.1 | MSMEG_5474 | MSMEG_1625 | Identified by match to protein family HMM PF00582. | Amino acid transporter, putative; Identified by match to protein family HMM PF00324. | 0.661 |
| ABK70087.1 | ABK69770.1 | MSMEG_5474 | MSMEG_5473 | Identified by match to protein family HMM PF00582. | Transporter; Identified by match to protein family HMM PF00324. | 0.864 |
| ABK70087.1 | ABK70370.1 | MSMEG_5474 | MSMEG_5458 | Identified by match to protein family HMM PF00582. | Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes. | 0.695 |
| ABK70087.1 | ABK70463.1 | MSMEG_5474 | MSMEG_3935 | Identified by match to protein family HMM PF00582. | Conserved hypothetical protein. | 0.579 |
| ABK70087.1 | ABK70833.1 | MSMEG_5474 | MSMEG_3975 | Identified by match to protein family HMM PF00582. | Regulatory protein, putative; Identified by match to protein family HMM PF07905. | 0.692 |
| ABK70087.1 | ABK72172.1 | MSMEG_5474 | MSMEG_4207 | Identified by match to protein family HMM PF00582. | Identified by match to protein family HMM PF00582. | 0.777 |
| ABK70087.1 | ABK74386.1 | MSMEG_5474 | MSMEG_1414 | Identified by match to protein family HMM PF00582. | Amidinotransferase; Identified by match to protein family HMM PF02274. | 0.666 |
| ABK70087.1 | ABK74518.1 | MSMEG_5474 | MSMEG_2447 | Identified by match to protein family HMM PF00582. | Identified by match to protein family HMM PF07905. | 0.621 |
| ABK70087.1 | ABK75021.1 | MSMEG_5474 | MSMEG_6688 | Identified by match to protein family HMM PF00582. | Identified by match to protein family HMM PF07905. | 0.598 |
| ABK70087.1 | ABK75624.1 | MSMEG_5474 | MSMEG_0579 | Identified by match to protein family HMM PF00582. | Helix-turn-helix, Fis-type; Identified by match to protein family HMM PF02954; match to protein family HMM PF07905. | 0.669 |
| ABK70370.1 | ABK70087.1 | MSMEG_5458 | MSMEG_5474 | Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes. | Identified by match to protein family HMM PF00582. | 0.695 |
| ABK70370.1 | ABK72172.1 | MSMEG_5458 | MSMEG_4207 | Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes. | Identified by match to protein family HMM PF00582. | 0.468 |
| ABK70463.1 | ABK70087.1 | MSMEG_3935 | MSMEG_5474 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.579 |
| ABK70463.1 | ABK72172.1 | MSMEG_3935 | MSMEG_4207 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.431 |
| ABK70833.1 | ABK70087.1 | MSMEG_3975 | MSMEG_5474 | Regulatory protein, putative; Identified by match to protein family HMM PF07905. | Identified by match to protein family HMM PF00582. | 0.692 |
| ABK70833.1 | ABK74518.1 | MSMEG_3975 | MSMEG_2447 | Regulatory protein, putative; Identified by match to protein family HMM PF07905. | Identified by match to protein family HMM PF07905. | 0.732 |
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