STRINGSTRING
gcl gcl ABK70474.1 ABK70474.1 ABK72439.1 ABK72439.1 ABK72920.1 ABK72920.1 glcB glcB ABK74579.1 ABK74579.1 aceA aceA ABK76154.1 ABK76154.1 aceA-2 aceA-2 ABK71418.1 ABK71418.1 ABK75134.1 ABK75134.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gclGlyoxylate carboligase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR01504; Belongs to the TPP enzyme family. (598 aa)    
Predicted Functional Partners:
ABK70474.1
2-hydroxy-3-oxopropionate reductase; Identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01505.
 
 
 0.991
ABK72439.1
Hydroxypyruvate isomerase, putative; Identified by similarity to SP:P30147; match to protein family HMM PF01261; Belongs to the hyi family.
 
 
 0.990
ABK72920.1
Identified by match to protein family HMM PF01261; Belongs to the hyi family.
  
 
 0.937
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.924
ABK74579.1
Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.910
aceA
Isocitrate lyase; Identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346.
   
 
 0.909
ABK76154.1
Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.909
aceA-2
Isocitrate lyase; Identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346.
   
 
 0.909
ABK71418.1
Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.908
ABK75134.1
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913.
  
 
 0.903
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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