STRINGSTRING
ABK74512.1 ABK74512.1 ABK71556.1 ABK71556.1 ABK70078.1 ABK70078.1 ABK75320.1 ABK75320.1 ABK75886.1 ABK75886.1 ABK72169.1 ABK72169.1 ABK72823.1 ABK72823.1 ABK70870.1 ABK70870.1 ABK75990.1 ABK75990.1 etfB etfB etfA etfA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74512.1acyl-CoA dehydrogenase fadE12; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. (386 aa)    
Predicted Functional Partners:
ABK71556.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
 0.975
ABK70078.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786.
  
 
 0.957
ABK75320.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
  
0.949
ABK75886.1
acetyl-CoA carboxylase carboxyltransferase; Identified by match to protein family HMM PF01039.
 
  
 0.909
ABK72169.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07287.
 
  
 0.837
ABK72823.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02785; match to protein family HMM PF02786.
  
 
 0.818
ABK70870.1
Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.
  
  
 0.792
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
 
 0.760
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
 
 
 0.736
etfA
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012.
 
 0.715
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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