Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70345.1 | ABK71106.1 | MSMEG_3149 | MSMEG_2695 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | 35 kDa protein; Identified by match to protein family HMM PF04012. | 0.422 |
ABK70345.1 | ABK72276.1 | MSMEG_3149 | MSMEG_2615 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | 0.727 |
ABK70345.1 | ABK73730.1 | MSMEG_3149 | MSMEG_5512 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Magnesium chelatase. | 0.761 |
ABK70345.1 | hemH | MSMEG_3149 | MSMEG_3152 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.612 |
ABK70494.1 | ABK73730.1 | MSMEG_5511 | MSMEG_5512 | Von Willebrand factor, type A. | Magnesium chelatase. | 0.984 |
ABK70599.1 | ABK71106.1 | MSMEG_4306 | MSMEG_2695 | Conserved hypothetical protein; Identified by match to protein family HMM PF02591. | 35 kDa protein; Identified by match to protein family HMM PF04012. | 0.537 |
ABK70599.1 | ABK71802.1 | MSMEG_4306 | MSMEG_1060 | Conserved hypothetical protein; Identified by match to protein family HMM PF02591. | Putative Lsr2 protein. | 0.588 |
ABK70599.1 | ABK73730.1 | MSMEG_4306 | MSMEG_5512 | Conserved hypothetical protein; Identified by match to protein family HMM PF02591. | Magnesium chelatase. | 0.739 |
ABK70599.1 | ABK74298.1 | MSMEG_4306 | MSMEG_3754 | Conserved hypothetical protein; Identified by match to protein family HMM PF02591. | TPR-repeat-containing protein. | 0.798 |
ABK71106.1 | ABK70345.1 | MSMEG_2695 | MSMEG_3149 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | 0.422 |
ABK71106.1 | ABK70599.1 | MSMEG_2695 | MSMEG_4306 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Conserved hypothetical protein; Identified by match to protein family HMM PF02591. | 0.537 |
ABK71106.1 | ABK71802.1 | MSMEG_2695 | MSMEG_1060 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Putative Lsr2 protein. | 0.590 |
ABK71106.1 | ABK73730.1 | MSMEG_2695 | MSMEG_5512 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Magnesium chelatase. | 0.754 |
ABK71106.1 | ABK74298.1 | MSMEG_2695 | MSMEG_3754 | 35 kDa protein; Identified by match to protein family HMM PF04012. | TPR-repeat-containing protein. | 0.772 |
ABK71802.1 | ABK70599.1 | MSMEG_1060 | MSMEG_4306 | Putative Lsr2 protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02591. | 0.588 |
ABK71802.1 | ABK71106.1 | MSMEG_1060 | MSMEG_2695 | Putative Lsr2 protein. | 35 kDa protein; Identified by match to protein family HMM PF04012. | 0.590 |
ABK71802.1 | ABK73730.1 | MSMEG_1060 | MSMEG_5512 | Putative Lsr2 protein. | Magnesium chelatase. | 0.816 |
ABK71802.1 | ABK74298.1 | MSMEG_1060 | MSMEG_3754 | Putative Lsr2 protein. | TPR-repeat-containing protein. | 0.816 |
ABK72276.1 | ABK70345.1 | MSMEG_2615 | MSMEG_3149 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | 0.727 |
ABK72276.1 | ABK73730.1 | MSMEG_2615 | MSMEG_5512 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Magnesium chelatase. | 0.971 |
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