Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70122.1 | ABK70757.1 | MSMEG_5520 | MSMEG_0528 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.495 |
ABK70122.1 | ABK71225.1 | MSMEG_5520 | MSMEG_5867 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Nuclear transport factor 2 (NTF2) domain superfamily protein; Identified by match to protein family HMM PF02136. | 0.481 |
ABK70122.1 | ABK71322.1 | MSMEG_5520 | MSMEG_3977 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.571 |
ABK70122.1 | ABK71452.1 | MSMEG_5520 | MSMEG_2904 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | MmcI protein. | 0.480 |
ABK70122.1 | ABK71554.1 | MSMEG_5520 | MSMEG_5519 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Monooxygenase; Identified by match to protein family HMM PF00296. | 0.618 |
ABK70122.1 | ABK72224.1 | MSMEG_5520 | MSMEG_2456 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 5,10-methylenetetrahydromethanopterin reductase; Identified by match to protein family HMM PF00296. | 0.503 |
ABK70122.1 | ABK72828.1 | MSMEG_5520 | MSMEG_5592 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein. | 0.617 |
ABK70122.1 | ABK72942.1 | MSMEG_5520 | MSMEG_5732 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Monooxygenase; Identified by match to protein family HMM PF00296. | 0.502 |
ABK70122.1 | ABK73664.1 | MSMEG_5520 | MSMEG_2516 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Putative oxidoreductase; Identified by match to protein family HMM PF00296. | 0.626 |
ABK70122.1 | ABK75450.1 | MSMEG_5520 | MSMEG_2996 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.594 |
ABK70757.1 | ABK70122.1 | MSMEG_0528 | MSMEG_5520 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.495 |
ABK70757.1 | ABK71322.1 | MSMEG_0528 | MSMEG_3977 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.739 |
ABK70757.1 | ABK71452.1 | MSMEG_0528 | MSMEG_2904 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | MmcI protein. | 0.401 |
ABK70757.1 | ABK72828.1 | MSMEG_0528 | MSMEG_5592 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein. | 0.711 |
ABK70757.1 | ABK75450.1 | MSMEG_0528 | MSMEG_2996 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.698 |
ABK71225.1 | ABK70122.1 | MSMEG_5867 | MSMEG_5520 | Nuclear transport factor 2 (NTF2) domain superfamily protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.481 |
ABK71322.1 | ABK70122.1 | MSMEG_3977 | MSMEG_5520 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.571 |
ABK71322.1 | ABK70757.1 | MSMEG_3977 | MSMEG_0528 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.739 |
ABK71322.1 | ABK71452.1 | MSMEG_3977 | MSMEG_2904 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | MmcI protein. | 0.713 |
ABK71322.1 | ABK72224.1 | MSMEG_3977 | MSMEG_2456 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 5,10-methylenetetrahydromethanopterin reductase; Identified by match to protein family HMM PF00296. | 0.730 |
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