STRINGSTRING
ABK70499.1 ABK70499.1 ABK71823.1 ABK71823.1 ABK70600.1 ABK70600.1 cobF cobF ABK69864.1 ABK69864.1 ABK75347.1 ABK75347.1 ABK76062.1 ABK76062.1 ABK72847.1 ABK72847.1 ABK74076.1 ABK74076.1 ABK70806.1 ABK70806.1 ABK69966.1 ABK69966.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70499.1Conserved hypothetical protein. (409 aa)    
Predicted Functional Partners:
ABK71823.1
Membrane spanning protein; Identified by match to protein family HMM PF04020.
       0.659
ABK70600.1
Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376.
 
    0.600
cobF
precorrin-6A synthase (deacetylating); Identified by match to protein family HMM PF00590; match to protein family HMM TIGR02434.
       0.594
ABK69864.1
Probable ferredoxin/ferredoxin--NADP reductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF07992.
 
    0.575
ABK75347.1
Conserved hypothetical protein.
  
  
 0.514
ABK76062.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.
  
 
 0.512
ABK72847.1
Conserved hypothetical protein.
  
  
 0.509
ABK74076.1
Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
  
 
 0.507
ABK70806.1
Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
  
 
 0.507
ABK69966.1
Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
  
 
 0.507
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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