STRINGSTRING
ABK71208.1 ABK71208.1 ABK70090.1 ABK70090.1 ABK73200.1 ABK73200.1 ABK71861.1 ABK71861.1 ABK72772.1 ABK72772.1 ABK71930.1 ABK71930.1 ABK73191.1 ABK73191.1 ABK71326.1 ABK71326.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK71208.1Transcriptional regulator; Identified by match to protein family HMM PF01047. (141 aa)    
Predicted Functional Partners:
ABK70090.1
MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047.
  
   
 0.664
ABK73200.1
Conserved hypothetical protein.
  
    0.554
ABK71861.1
Leucine-responsive regulatory protein; Identified by match to protein family HMM PF01037.
   
  
 0.471
ABK72772.1
Clavaldehyde dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.469
ABK71930.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
  
 0.464
ABK73191.1
MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047; match to protein family HMM PF01978.
  
  
 0.451
ABK71326.1
Clavaldehyde dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.434
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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