STRINGSTRING
ABK72064.1 ABK72064.1 ABK71369.1 ABK71369.1 ABK75168.1 ABK75168.1 ABK73313.1 ABK73313.1 ABK71632.1 ABK71632.1 ABK73052.1 ABK73052.1 ABK75908.1 ABK75908.1 ABK75230.1 ABK75230.1 ABK71447.1 ABK71447.1 ABK76089.1 ABK76089.1 ABK69530.1 ABK69530.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72064.1Substrate binding protein; Identified by match to protein family HMM PF01547. (447 aa)    
Predicted Functional Partners:
ABK71369.1
Sugar ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.997
ABK75168.1
Sugar ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.994
ABK73313.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
 
 0.973
ABK71632.1
ABC transporter, nucleotide binding/ATPase protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
 
 0.886
ABK73052.1
Glycerol-phosphate porter; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily.
  
 
 0.885
ABK75908.1
ABC transporter, ATPase subunit; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
 
 0.885
ABK75230.1
ABC transporter, ATP-binding protein SugC; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
 
 0.884
ABK71447.1
D-mannonate oxidoreductase; Identified by match to protein family HMM PF01232; match to protein family HMM PF08125.
 
  
 0.882
ABK76089.1
Repressor; Identified by match to protein family HMM PF04198.
 
    0.863
ABK69530.1
Fructokinase; Identified by match to protein family HMM PF00294.
 
  
 0.682
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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