STRINGSTRING
ABK74223.1 ABK74223.1 ABK73455.1 ABK73455.1 ABK71682.1 ABK71682.1 ABK70103.1 ABK70103.1 ABK72561.1 ABK72561.1 ABK69634.1 ABK69634.1 ABK73497.1 ABK73497.1 ABK75396.1 ABK75396.1 ABK74347.1 ABK74347.1 ABK75868.1 ABK75868.1 ABK72679.1 ABK72679.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74223.1Short chain dehydrogenase; Identified by match to protein family HMM PF00106. (264 aa)    
Predicted Functional Partners:
ABK73455.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01113; match to protein family HMM PF01408.
 
    0.913
ABK71682.1
Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.768
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.740
ABK72561.1
3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106.
  
     0.668
ABK69634.1
Dehydrogenase; Identified by match to protein family HMM PF00106.
  
    0.650
ABK73497.1
MaoC like domain, putative; Identified by match to protein family HMM PF01575.
 
 0.572
ABK75396.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
  
    0.562
ABK74347.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.545
ABK75868.1
Conserved hypothetical protein.
 
 
 0.534
ABK72679.1
Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.
 
0.523
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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