STRINGSTRING
ABK73455.1 ABK73455.1 ABK74223.1 ABK74223.1 ABK75868.1 ABK75868.1 ABK74331.1 ABK74331.1 pcaC-6 pcaC-6 ABK72447.1 ABK72447.1 ABK69760.1 ABK69760.1 ABK73497.1 ABK73497.1 ABK74901.1 ABK74901.1 ABK69648.1 ABK69648.1 ABK75396.1 ABK75396.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73455.1Conserved hypothetical protein; Identified by match to protein family HMM PF01113; match to protein family HMM PF01408. (358 aa)    
Predicted Functional Partners:
ABK74223.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
 
    0.913
ABK75868.1
Conserved hypothetical protein.
  
    0.730
ABK74331.1
Conserved hypothetical protein.
 
    0.621
pcaC-6
4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627.
 
    0.617
ABK72447.1
Conserved hypothetical protein.
 
    0.615
ABK69760.1
Conserved hypothetical protein.
  
    0.605
ABK73497.1
MaoC like domain, putative; Identified by match to protein family HMM PF01575.
 
    0.594
ABK74901.1
Conserved hypothetical protein.
 
    0.553
ABK69648.1
Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
 
    0.543
ABK75396.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
  
    0.543
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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