Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70214.1 | ABK71749.1 | MSMEG_2669 | MSMEG_5591 | Hydrolase; Identified by match to protein family HMM PF01738. | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | 0.523 |
ABK70214.1 | ABK74524.1 | MSMEG_2669 | MSMEG_2444 | Hydrolase; Identified by match to protein family HMM PF01738. | Identified by match to protein family HMM PF01738. | 0.927 |
ABK70597.1 | ABK71749.1 | MSMEG_5588 | MSMEG_5591 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | 0.553 |
ABK70597.1 | mntH | MSMEG_5588 | MSMEG_5589 | Hypothetical protein; Identified by Glimmer2; putative. | Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | 0.553 |
ABK71749.1 | ABK70214.1 | MSMEG_5591 | MSMEG_2669 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Hydrolase; Identified by match to protein family HMM PF01738. | 0.523 |
ABK71749.1 | ABK70597.1 | MSMEG_5591 | MSMEG_5588 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Hypothetical protein; Identified by Glimmer2; putative. | 0.553 |
ABK71749.1 | ABK72502.1 | MSMEG_5591 | MSMEG_2128 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Malonyl CoA decarboxylase. | 0.603 |
ABK71749.1 | ABK73062.1 | MSMEG_5591 | MSMEG_5236 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Identified by match to protein family HMM PF01738. | 0.572 |
ABK71749.1 | ABK73397.1 | MSMEG_5591 | MSMEG_5694 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Conserved hypothetical protein. | 0.585 |
ABK71749.1 | ABK74524.1 | MSMEG_5591 | MSMEG_2444 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Identified by match to protein family HMM PF01738. | 0.520 |
ABK71749.1 | ABK74803.1 | MSMEG_5591 | MSMEG_1361 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748. | 0.500 |
ABK71749.1 | ABK75340.1 | MSMEG_5591 | MSMEG_1199 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Conserved hypothetical protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | 0.517 |
ABK71749.1 | ABK76011.1 | MSMEG_5591 | MSMEG_4456 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Conserved hypothetical protein. | 0.490 |
ABK71749.1 | mntH | MSMEG_5591 | MSMEG_5589 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. | 0.897 |
ABK72502.1 | ABK71749.1 | MSMEG_2128 | MSMEG_5591 | Malonyl CoA decarboxylase. | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | 0.603 |
ABK72502.1 | ABK73397.1 | MSMEG_2128 | MSMEG_5694 | Malonyl CoA decarboxylase. | Conserved hypothetical protein. | 0.584 |
ABK72502.1 | ABK75340.1 | MSMEG_2128 | MSMEG_1199 | Malonyl CoA decarboxylase. | Conserved hypothetical protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | 0.465 |
ABK73062.1 | ABK71749.1 | MSMEG_5236 | MSMEG_5591 | Identified by match to protein family HMM PF01738. | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | 0.572 |
ABK73397.1 | ABK71749.1 | MSMEG_5694 | MSMEG_5591 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | 0.585 |
ABK73397.1 | ABK72502.1 | MSMEG_5694 | MSMEG_2128 | Conserved hypothetical protein. | Malonyl CoA decarboxylase. | 0.584 |
page 1 of 2