STRINGSTRING
ABK71749.1 ABK71749.1 mntH mntH ABK72502.1 ABK72502.1 ABK73397.1 ABK73397.1 ABK73062.1 ABK73062.1 ABK70597.1 ABK70597.1 ABK70214.1 ABK70214.1 ABK74524.1 ABK74524.1 ABK75340.1 ABK75340.1 ABK74803.1 ABK74803.1 ABK76011.1 ABK76011.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71749.1Conserved hypothetical protein; Identified by match to protein family HMM PF05908. (352 aa)    
Predicted Functional Partners:
mntH
Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
  
    0.897
ABK72502.1
Malonyl CoA decarboxylase.
 
     0.603
ABK73397.1
Conserved hypothetical protein.
  
    0.585
ABK73062.1
Identified by match to protein family HMM PF01738.
 
  
 0.572
ABK70597.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.553
ABK70214.1
Hydrolase; Identified by match to protein family HMM PF01738.
  
  
 0.523
ABK74524.1
Identified by match to protein family HMM PF01738.
  
  
 0.520
ABK75340.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374.
  
    0.517
ABK74803.1
Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.
  
     0.500
ABK76011.1
Conserved hypothetical protein.
  
    0.490
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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