Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70584.1 | ABK72694.1 | MSMEG_5638 | MSMEG_5637 | Metallo-beta-lactamase family protein. | Identified by match to protein family HMM PF00144. | 0.715 |
ABK70584.1 | ABK72904.1 | MSMEG_5638 | MSMEG_5635 | Metallo-beta-lactamase family protein. | Conserved hypothetical protein. | 0.696 |
ABK70584.1 | ABK73808.1 | MSMEG_5638 | MSMEG_5639 | Metallo-beta-lactamase family protein. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.913 |
ABK70584.1 | ABK74323.1 | MSMEG_5638 | MSMEG_5634 | Metallo-beta-lactamase family protein. | Conserved hypothetical protein. | 0.686 |
ABK70584.1 | ctpE | MSMEG_5638 | MSMEG_5636 | Metallo-beta-lactamase family protein. | P-type ATPase - metal cation transport; P-type ATPase involved in specific uptake of calcium. Essential for growth and maintenance of cell surface integrity under Ca(2+)-deficient conditions. | 0.821 |
ABK70716.1 | ABK72192.1 | MSMEG_2742 | MSMEG_1623 | Identified by match to protein family HMM PF01476. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. | 0.542 |
ABK70716.1 | ABK72379.1 | MSMEG_2742 | MSMEG_0959 | Identified by match to protein family HMM PF01476. | Putative conserved transmembrane protein. | 0.627 |
ABK70716.1 | ABK72891.1 | MSMEG_2742 | MSMEG_0736 | Identified by match to protein family HMM PF01476. | Conserved hypothetical protein. | 0.642 |
ABK70716.1 | ABK74323.1 | MSMEG_2742 | MSMEG_5634 | Identified by match to protein family HMM PF01476. | Conserved hypothetical protein. | 0.657 |
ABK72192.1 | ABK70716.1 | MSMEG_1623 | MSMEG_2742 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. | Identified by match to protein family HMM PF01476. | 0.542 |
ABK72192.1 | ABK72379.1 | MSMEG_1623 | MSMEG_0959 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. | Putative conserved transmembrane protein. | 0.415 |
ABK72192.1 | ABK74323.1 | MSMEG_1623 | MSMEG_5634 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. | Conserved hypothetical protein. | 0.606 |
ABK72379.1 | ABK70716.1 | MSMEG_0959 | MSMEG_2742 | Putative conserved transmembrane protein. | Identified by match to protein family HMM PF01476. | 0.627 |
ABK72379.1 | ABK72192.1 | MSMEG_0959 | MSMEG_1623 | Putative conserved transmembrane protein. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. | 0.415 |
ABK72379.1 | ABK72891.1 | MSMEG_0959 | MSMEG_0736 | Putative conserved transmembrane protein. | Conserved hypothetical protein. | 0.663 |
ABK72379.1 | ABK74323.1 | MSMEG_0959 | MSMEG_5634 | Putative conserved transmembrane protein. | Conserved hypothetical protein. | 0.721 |
ABK72379.1 | ABK74560.1 | MSMEG_0959 | MSMEG_0909 | Putative conserved transmembrane protein. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.512 |
ABK72694.1 | ABK70584.1 | MSMEG_5637 | MSMEG_5638 | Identified by match to protein family HMM PF00144. | Metallo-beta-lactamase family protein. | 0.715 |
ABK72694.1 | ABK72904.1 | MSMEG_5637 | MSMEG_5635 | Identified by match to protein family HMM PF00144. | Conserved hypothetical protein. | 0.696 |
ABK72694.1 | ABK73808.1 | MSMEG_5637 | MSMEG_5639 | Identified by match to protein family HMM PF00144. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.673 |
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