STRINGSTRING
ABK75698.1 ABK75698.1 ABK74997.1 ABK74997.1 ABK72491.1 ABK72491.1 ABK73808.1 ABK73808.1 ABK70584.1 ABK70584.1 pgm pgm treZ treZ ABK69944.1 ABK69944.1 ABK72694.1 ABK72694.1 ctpE ctpE ABK74945.1 ABK74945.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK75698.1Amylo-alpha-1,6-glucosidase; Identified by match to protein family HMM PF06202. (708 aa)    
Predicted Functional Partners:
ABK74997.1
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
 
 0.982
ABK72491.1
Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094.
  
 
 0.795
ABK73808.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.725
ABK70584.1
Metallo-beta-lactamase family protein.
  
    0.719
pgm
Phosphoglucomutase, alpha-D-glucose phosphate-specific; Identified by similarity to SP:P36938; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01132.
   
  
 0.612
treZ
Malto-oligosyltrehalose trehalohydrolase; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.
 
  
 0.609
ABK69944.1
Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039.
  
    0.592
ABK72694.1
Identified by match to protein family HMM PF00144.
  
    0.583
ctpE
P-type ATPase - metal cation transport; P-type ATPase involved in specific uptake of calcium. Essential for growth and maintenance of cell surface integrity under Ca(2+)-deficient conditions.
  
    0.576
ABK74945.1
Phosphoribosyltransferase; Identified by match to protein family HMM PF00156.
 
    0.570
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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