Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70417.1 | ABK71970.1 | MSMEG_0215 | MSMEG_5644 | Identified by match to protein family HMM PF02678; Belongs to the pirin family. | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | 0.430 |
ABK70442.1 | ABK71970.1 | MSMEG_0085 | MSMEG_5644 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | 0.420 |
ABK70946.1 | ABK71970.1 | MSMEG_5645 | MSMEG_5644 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | 0.942 |
ABK70946.1 | ABK73393.1 | MSMEG_5645 | MSMEG_6442 | Conserved hypothetical protein. | Integral membrane protein. | 0.539 |
ABK71970.1 | ABK70417.1 | MSMEG_5644 | MSMEG_0215 | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | Identified by match to protein family HMM PF02678; Belongs to the pirin family. | 0.430 |
ABK71970.1 | ABK70442.1 | MSMEG_5644 | MSMEG_0085 | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | 0.420 |
ABK71970.1 | ABK70946.1 | MSMEG_5644 | MSMEG_5645 | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | Conserved hypothetical protein. | 0.942 |
ABK71970.1 | ABK72570.1 | MSMEG_5644 | MSMEG_6210 | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | Conserved hypothetical protein. | 0.405 |
ABK71970.1 | ABK73393.1 | MSMEG_5644 | MSMEG_6442 | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | Integral membrane protein. | 0.412 |
ABK71970.1 | ABK73920.1 | MSMEG_5644 | MSMEG_2524 | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.451 |
ABK72570.1 | ABK71970.1 | MSMEG_6210 | MSMEG_5644 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | 0.405 |
ABK72570.1 | ABK73393.1 | MSMEG_6210 | MSMEG_6442 | Conserved hypothetical protein. | Integral membrane protein. | 0.426 |
ABK73393.1 | ABK70946.1 | MSMEG_6442 | MSMEG_5645 | Integral membrane protein. | Conserved hypothetical protein. | 0.539 |
ABK73393.1 | ABK71970.1 | MSMEG_6442 | MSMEG_5644 | Integral membrane protein. | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | 0.412 |
ABK73393.1 | ABK72570.1 | MSMEG_6442 | MSMEG_6210 | Integral membrane protein. | Conserved hypothetical protein. | 0.426 |
ABK73920.1 | ABK71970.1 | MSMEG_2524 | MSMEG_5644 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062. | 0.451 |