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ABK72824.1 ABK72824.1 ABK71029.1 ABK71029.1 hisD-3 hisD-3 ABK73150.1 ABK73150.1 pyrB pyrB hutF hutF carB carB upp upp ABK73057.1 ABK73057.1 thiD thiD ABK72315.1 ABK72315.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK72824.1Identified by match to protein family HMM PF02133; Belongs to the purine-cytosine permease (2.A.39) family. (495 aa)    
Predicted Functional Partners:
ABK71029.1
Identified by match to protein family HMM PF00795.
  
    0.773
hisD-3
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
    0.755
ABK73150.1
Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
    0.536
pyrB
Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.441
hutF
Formiminoglutamate deiminase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02022.
  
  
 0.428
carB
Carbamoyl-phosphate synthase, large subunit; Identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02655; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369; Belongs to the CarB family.
   
    0.422
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
  
 0.414
ABK73057.1
Phosphomethylpyrimidine kinase.
  
  
 0.412
thiD
Phosphomethylpyrimidine kinase; Identified by match to protein family HMM TIGR00097.
  
  
 0.411
ABK72315.1
Epoxide hydrolase; Identified by match to protein family HMM PF00561; match to protein family HMM PF06441.
  
    0.406
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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