STRINGSTRING
ABK75200.1 ABK75200.1 ABK74276.1 ABK74276.1 ABK76207.1 ABK76207.1 ABK73217.1 ABK73217.1 ABK74439.1 ABK74439.1 ABK70943.1 ABK70943.1 ABK70066.1 ABK70066.1 ABK74656.1 ABK74656.1 ABK70257.1 ABK70257.1 aftA aftA ABK75690.1 ABK75690.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75200.1Conserved hypothetical protein. (89 aa)    
Predicted Functional Partners:
ABK74276.1
Regulatory protein, MarR; Identified by match to protein family HMM PF01047.
       0.791
ABK76207.1
Conserved hypothetical protein.
  
    0.771
ABK73217.1
Conserved hypothetical protein.
  
    0.757
ABK74439.1
Conserved hypothetical protein.
  
    0.755
ABK70943.1
Conserved hypothetical protein.
  
    0.739
ABK70066.1
Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.
  
    0.737
ABK74656.1
Membrane protein, MmpL family protein.
  
    0.683
ABK70257.1
Conserved hypothetical protein.
 
    0.665
aftA
Membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of the first key arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-5 of a 6-linked galactofuranosyl (Galf) of the galactan domain, thus 'priming' the galactan for further elaboration by other arabinofuranosyltransferases. It is not able to add an Araf residue to a terminal Galf.
  
     0.663
ABK75690.1
Conserved hypothetical protein.
  
    0.651
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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