STRINGSTRING
ABK76207.1 ABK76207.1 ABK75200.1 ABK75200.1 ABK74686.1 ABK74686.1 ABK71293.1 ABK71293.1 ABK74276.1 ABK74276.1 ABK70257.1 ABK70257.1 ABK71772.1 ABK71772.1 ABK71798.1 ABK71798.1 ABK73223.1 ABK73223.1 ABK75658.1 ABK75658.1 recB recB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76207.1Conserved hypothetical protein. (150 aa)    
Predicted Functional Partners:
ABK75200.1
Conserved hypothetical protein.
  
    0.771
ABK74686.1
Identified by match to protein family HMM PF00196.
 
     0.560
ABK71293.1
23s ribosomal RNA methyltransferase; Identified by match to protein family HMM PF00588.
       0.547
ABK74276.1
Regulatory protein, MarR; Identified by match to protein family HMM PF01047.
       0.547
ABK70257.1
Conserved hypothetical protein.
       0.512
ABK71772.1
Conserved hypothetical protein.
 
     0.509
ABK71798.1
Conserved hypothetical protein.
  
     0.500
ABK73223.1
Conserved hypothetical protein.
  
     0.495
ABK75658.1
Conserved hypothetical protein.
  
     0.466
recB
Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes DNA-dependent ATPase activity, exonuclease activity and 3'-5' helicase activity (By similarity). Unlike the case in E.coli, suppresses RecA- dependent homologous recombination, is instead required for single- strand annealin [...]
  
     0.454
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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