STRINGSTRING
ABK73539.1 ABK73539.1 ABK73397.1 ABK73397.1 ABK75806.1 ABK75806.1 rseA rseA ABK69728.1 ABK69728.1 ABK69866.1 ABK69866.1 ABK73545.1 ABK73545.1 ABK74620.1 ABK74620.1 ABK70363.1 ABK70363.1 ABK74249.1 ABK74249.1 ABK71568.1 ABK71568.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73539.1Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. (515 aa)    
Predicted Functional Partners:
ABK73397.1
Conserved hypothetical protein.
  
    0.957
ABK75806.1
Conserved hypothetical protein.
  
    0.804
rseA
Conserved hypothetical protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigE. ECF sigma factors are held in an inactive form by an anti-sigma factor (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily.
  
    0.694
ABK69728.1
Conserved hypothetical protein.
  
   
 0.693
ABK69866.1
Conserved hypothetical protein.
  
    0.683
ABK73545.1
Conserved hypothetical protein.
  
   
 0.667
ABK74620.1
Conserved hypothetical protein.
  
     0.642
ABK70363.1
Conserved hypothetical protein.
  
    0.629
ABK74249.1
Conserved hypothetical protein.
  
    0.627
ABK71568.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03084.
  
    0.626
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.