Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69817.1 | ABK70438.1 | MSMEG_5062 | MSMEG_5705 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.624 |
| ABK70222.1 | ABK70438.1 | MSMEG_5706 | MSMEG_5705 | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Conserved hypothetical protein. | 0.952 |
| ABK70222.1 | ABK72145.1 | MSMEG_5706 | MSMEG_5704 | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Conserved hypothetical protein. | 0.737 |
| ABK70222.1 | ABK72445.1 | MSMEG_5706 | MSMEG_5702 | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Molybdenum cofactor synthesis domain protein; Identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177. | 0.655 |
| ABK70222.1 | moaC | MSMEG_5706 | MSMEG_5703 | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.665 |
| ABK70222.1 | moaE | MSMEG_5706 | MSMEG_5701 | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391. | 0.556 |
| ABK70438.1 | ABK69817.1 | MSMEG_5705 | MSMEG_5062 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.624 |
| ABK70438.1 | ABK70222.1 | MSMEG_5705 | MSMEG_5706 | Conserved hypothetical protein. | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | 0.952 |
| ABK70438.1 | ABK71094.1 | MSMEG_5705 | MSMEG_1823 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 0.656 |
| ABK70438.1 | ABK71220.1 | MSMEG_5705 | MSMEG_1803 | Conserved hypothetical protein. | RsbW protein. | 0.658 |
| ABK70438.1 | ABK72145.1 | MSMEG_5705 | MSMEG_5704 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.672 |
| ABK70438.1 | ABK72445.1 | MSMEG_5705 | MSMEG_5702 | Conserved hypothetical protein. | Molybdenum cofactor synthesis domain protein; Identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177. | 0.798 |
| ABK70438.1 | ABK74802.1 | MSMEG_5705 | MSMEG_2359 | Conserved hypothetical protein. | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | 0.618 |
| ABK70438.1 | dop | MSMEG_5705 | MSMEG_3897 | Conserved hypothetical protein. | Proteasome component; Specifically catalyzes the deamidation of the C-terminal glutamine of the prokaryotic ubiquitin-like protein Pup to glutamate, thereby rendering Pup competent for conjugation. Probably also displays depupylase (DPUP) activity, removing conjugated Pup from target proteins; thus may be involved in the recycling of Pup and may function similarly to deubiquitinases (DUBs) in eukaryotes to prevent or promote proteasomal degradation of certain proteins. Belongs to the Pup ligase/Pup deamidase family. Pup deamidase subfamily. | 0.735 |
| ABK70438.1 | moaC | MSMEG_5705 | MSMEG_5703 | Conserved hypothetical protein. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.684 |
| ABK70438.1 | moaE | MSMEG_5705 | MSMEG_5701 | Conserved hypothetical protein. | Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391. | 0.747 |
| ABK71094.1 | ABK70438.1 | MSMEG_1823 | MSMEG_5705 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Conserved hypothetical protein. | 0.656 |
| ABK71094.1 | ABK71220.1 | MSMEG_1823 | MSMEG_1803 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | RsbW protein. | 0.404 |
| ABK71094.1 | ABK74802.1 | MSMEG_1823 | MSMEG_2359 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | 0.715 |
| ABK71220.1 | ABK70438.1 | MSMEG_1803 | MSMEG_5705 | RsbW protein. | Conserved hypothetical protein. | 0.658 |
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