STRINGSTRING
ABK73085.1 ABK73085.1 ABK70453.1 ABK70453.1 ABK72729.1 ABK72729.1 ABK70107.1 ABK70107.1 ABK73109.1 ABK73109.1 ABK74401.1 ABK74401.1 ABK73352.1 ABK73352.1 purN purN ABK74099.1 ABK74099.1 ABK72010.1 ABK72010.1 ABK75103.1 ABK75103.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73085.1Conserved hypothetical protein. (177 aa)    
Predicted Functional Partners:
ABK70453.1
Conserved hypothetical protein.
   
  
 0.833
ABK72729.1
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.817
ABK70107.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05305.
   
  
 0.817
ABK73109.1
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.816
ABK74401.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557.
   
  
 0.816
ABK73352.1
Phytase.
   
  
 0.812
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.687
ABK74099.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.629
ABK72010.1
Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005.
   
  
 0.516
ABK75103.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
  
    0.468
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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