STRINGSTRING
ABK72589.1 ABK72589.1 ABK73521.1 ABK73521.1 saeC saeC ctpE ctpE ABK74175.1 ABK74175.1 ABK75794.1 ABK75794.1 ABK73113.1 ABK73113.1 ABK74013.1 ABK74013.1 ABK75720.1 ABK75720.1 ABK71059.1 ABK71059.1 ABK76032.1 ABK76032.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72589.1Major facilitator family protein transporter; Identified by match to protein family HMM PF06779; match to protein family HMM PF07690. (410 aa)    
Predicted Functional Partners:
ABK73521.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.545
saeC
Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain.
   
 0.470
ctpE
P-type ATPase - metal cation transport; P-type ATPase involved in specific uptake of calcium. Essential for growth and maintenance of cell surface integrity under Ca(2+)-deficient conditions.
  
 0.467
ABK74175.1
Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494.
  
 0.465
ABK75794.1
Large subunit of N,N-dimethylformamidase.
   
  0.437
ABK73113.1
Conserved hypothetical protein.
   
  0.434
ABK74013.1
Conserved hypothetical protein.
   
  0.432
ABK75720.1
Integral membrane protein DUF6; Identified by match to protein family HMM PF00892.
 
 
 0.432
ABK71059.1
Conserved hypothetical protein.
    
  0.425
ABK76032.1
Conserved hypothetical protein.
    
  0.425
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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