Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69714.1 | ABK71065.1 | MSMEG_6258 | MSMEG_1084 | Identified by match to protein family HMM PF00881. | Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.754 |
| ABK69714.1 | ABK71083.1 | MSMEG_6258 | MSMEG_1090 | Identified by match to protein family HMM PF00881. | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | 0.754 |
| ABK69714.1 | ABK71257.1 | MSMEG_6258 | MSMEG_6734 | Identified by match to protein family HMM PF00881. | Dibenzothiophene desulfurization enzyme A. | 0.776 |
| ABK69714.1 | ABK73254.1 | MSMEG_6258 | MSMEG_4638 | Identified by match to protein family HMM PF00881. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.637 |
| ABK69714.1 | ABK74114.1 | MSMEG_6258 | MSMEG_5734 | Identified by match to protein family HMM PF00881. | alpha-methylacyl-CoA racemase; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.759 |
| ABK69714.1 | ABK75980.1 | MSMEG_6258 | MSMEG_2981 | Identified by match to protein family HMM PF00881. | Branched-chain amino acid ABC-type transport system, permease component; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.589 |
| ABK69766.1 | ABK70258.1 | MSMEG_2468 | MSMEG_0262 | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.727 |
| ABK69766.1 | ABK74114.1 | MSMEG_2468 | MSMEG_5734 | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | alpha-methylacyl-CoA racemase; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.645 |
| ABK70258.1 | ABK69766.1 | MSMEG_0262 | MSMEG_2468 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.727 |
| ABK70258.1 | ABK74114.1 | MSMEG_0262 | MSMEG_5734 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | alpha-methylacyl-CoA racemase; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.680 |
| ABK71065.1 | ABK69714.1 | MSMEG_1084 | MSMEG_6258 | Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496. | Identified by match to protein family HMM PF00881. | 0.754 |
| ABK71065.1 | ABK71083.1 | MSMEG_1084 | MSMEG_1090 | Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496. | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | 0.763 |
| ABK71065.1 | ABK71257.1 | MSMEG_1084 | MSMEG_6734 | Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496. | Dibenzothiophene desulfurization enzyme A. | 0.762 |
| ABK71065.1 | ABK73254.1 | MSMEG_1084 | MSMEG_4638 | Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.594 |
| ABK71065.1 | ABK74114.1 | MSMEG_1084 | MSMEG_5734 | Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496. | alpha-methylacyl-CoA racemase; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.760 |
| ABK71065.1 | ABK75980.1 | MSMEG_1084 | MSMEG_2981 | Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496. | Branched-chain amino acid ABC-type transport system, permease component; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.592 |
| ABK71083.1 | ABK69714.1 | MSMEG_1090 | MSMEG_6258 | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | Identified by match to protein family HMM PF00881. | 0.754 |
| ABK71083.1 | ABK71065.1 | MSMEG_1090 | MSMEG_1084 | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.763 |
| ABK71083.1 | ABK71257.1 | MSMEG_1090 | MSMEG_6734 | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | Dibenzothiophene desulfurization enzyme A. | 0.756 |
| ABK71083.1 | ABK73254.1 | MSMEG_1090 | MSMEG_4638 | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.599 |
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