STRINGSTRING
ABK71476.1 ABK71476.1 ABK71727.1 ABK71727.1 gvpK gvpK ABK75547.1 ABK75547.1 ABK71154.1 ABK71154.1 ABK74650.1 ABK74650.1 ABK76189.1 ABK76189.1 ABK75641.1 ABK75641.1 ABK70337.1 ABK70337.1 ABK73401.1 ABK73401.1 ABK74175.1 ABK74175.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71476.1Acyltransferase domain protein; Identified by match to protein family HMM PF01553. (332 aa)    
Predicted Functional Partners:
ABK71727.1
Patatin; Identified by match to protein family HMM PF01734.
 
  
 0.952
gvpK
Gas vesicle protein K; Identified by match to protein family HMM PF05121.
  
    0.737
ABK75547.1
Gas vesicle synthesis protein; Identified by match to protein family HMM PF00741.
  
    0.736
ABK71154.1
Gas vesicle protein; Identified by match to protein family HMM PF06386.
       0.732
ABK74650.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.701
ABK76189.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02698.
  
    0.694
ABK75641.1
Identified by match to protein family HMM PF00614.
 
 
 0.693
ABK70337.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.559
ABK73401.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.552
ABK74175.1
Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494.
  
 0.548
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (30%) [HD]