STRINGSTRING
ABK70378.1 ABK70378.1 ABK73401.1 ABK73401.1 ABK71612.1 ABK71612.1 ABK76219.1 ABK76219.1 ABK74650.1 ABK74650.1 gvpK gvpK ABK71154.1 ABK71154.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70378.1Putative adhesin/hemolysin. (97 aa)    
Predicted Functional Partners:
ABK73401.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.515
ABK71612.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.514
ABK76219.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.513
ABK74650.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.416
gvpK
Gas vesicle protein K; Identified by match to protein family HMM PF05121.
  
    0.401
ABK71154.1
Gas vesicle protein; Identified by match to protein family HMM PF06386.
  
    0.400
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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