Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69675.1 | ABK69959.1 | MSMEG_5753 | MSMEG_1403 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | 0.738 |
ABK69675.1 | ABK71502.1 | MSMEG_5753 | MSMEG_6231 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Conserved hypothetical protein. | 0.524 |
ABK69675.1 | ABK71717.1 | MSMEG_5753 | MSMEG_2157 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Hypothetical protein; Identified by Glimmer2; putative. | 0.657 |
ABK69675.1 | ABK71786.1 | MSMEG_5753 | MSMEG_3709 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Conserved hypothetical protein. | 0.616 |
ABK69675.1 | ABK72181.1 | MSMEG_5753 | MSMEG_0492 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Conserved hypothetical protein. | 0.607 |
ABK69675.1 | ABK73760.1 | MSMEG_5753 | MSMEG_3595 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Conserved hypothetical protein. | 0.504 |
ABK69675.1 | ABK74753.1 | MSMEG_5753 | MSMEG_0221 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Secreted protein. | 0.501 |
ABK69675.1 | ABK75214.1 | MSMEG_5753 | MSMEG_2774 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Diguanylate cyclase (ggdef) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.514 |
ABK69675.1 | ABK76189.1 | MSMEG_5753 | MSMEG_5741 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Conserved hypothetical protein; Identified by match to protein family HMM PF02698. | 0.510 |
ABK69675.1 | ethR | MSMEG_5753 | MSMEG_6441 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Transcriptional regulator, TetR family protein; Involved in the repression of teh monooxygenase EthA which is responsible of the formation of the active metabolite of ethionamide (ETH). | 0.762 |
ABK69959.1 | ABK69675.1 | MSMEG_1403 | MSMEG_5753 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.738 |
ABK69959.1 | ABK71502.1 | MSMEG_1403 | MSMEG_6231 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Conserved hypothetical protein. | 0.466 |
ABK69959.1 | ABK71717.1 | MSMEG_1403 | MSMEG_2157 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Hypothetical protein; Identified by Glimmer2; putative. | 0.669 |
ABK69959.1 | ABK71786.1 | MSMEG_1403 | MSMEG_3709 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Conserved hypothetical protein. | 0.453 |
ABK69959.1 | ABK72181.1 | MSMEG_1403 | MSMEG_0492 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Conserved hypothetical protein. | 0.481 |
ABK69959.1 | ABK74753.1 | MSMEG_1403 | MSMEG_0221 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Secreted protein. | 0.642 |
ABK69959.1 | ABK75214.1 | MSMEG_1403 | MSMEG_2774 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Diguanylate cyclase (ggdef) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.705 |
ABK71502.1 | ABK69675.1 | MSMEG_6231 | MSMEG_5753 | Conserved hypothetical protein. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.524 |
ABK71502.1 | ABK69959.1 | MSMEG_6231 | MSMEG_1403 | Conserved hypothetical protein. | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | 0.466 |
ABK71717.1 | ABK69675.1 | MSMEG_2157 | MSMEG_5753 | Hypothetical protein; Identified by Glimmer2; putative. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.657 |
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