STRINGSTRING
ABK76029.1 ABK76029.1 ABK74145.1 ABK74145.1 ABK70413.1 ABK70413.1 ABK71679.1 ABK71679.1 ABK72637.1 ABK72637.1 ABK70716.1 ABK70716.1 ABK74323.1 ABK74323.1 ABK75960.1 ABK75960.1 ABK76164.1 ABK76164.1 ABK71860.1 ABK71860.1 lprG lprG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76029.1Conserved hypothetical protein. (337 aa)    
Predicted Functional Partners:
ABK74145.1
Conserved hypothetical protein.
 
    0.941
ABK70413.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
     0.647
ABK71679.1
Fatty acid desaturase; Identified by match to protein family HMM PF03405.
 
     0.601
ABK72637.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.581
ABK70716.1
Identified by match to protein family HMM PF01476.
  
    0.578
ABK74323.1
Conserved hypothetical protein.
  
     0.565
ABK75960.1
Conserved hypothetical protein.
  
    0.541
ABK76164.1
tRNA-dihydrouridine synthase, putative; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.541
ABK71860.1
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.
  
    0.536
lprG
LprG protein; Probably helps membrane protein MSMEG_3069/MSMEI_2992 (P55) transport triacylglycerides (TAG) across the inner cell membrane into the periplasm and probably ultimately to the outer membrane (By similarity). Required for MSMEG_3069/MSMEI_2992 export activity. Export of ethidium bromide by MSMEG_3069/MSMEI_2992 can be complemented by the equivalent operon from M.tuberculosis (lprG-Rv1410c). Belongs to the LppX/LprAFG lipoprotein family.
  
     0.532
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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