STRINGSTRING
ABK74340.1 ABK74340.1 ABK74597.1 ABK74597.1 phoU-2 phoU-2 ABK73443.1 ABK73443.1 rfbD rfbD ABK73029.1 ABK73029.1 ABK71650.1 ABK71650.1 ABK73397.1 ABK73397.1 ABK72280.1 ABK72280.1 ABK70500.1 ABK70500.1 ABK70495.1 ABK70495.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK74340.1Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. (722 aa)    
Predicted Functional Partners:
ABK74597.1
Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
 
   
0.863
phoU-2
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
  
    0.810
ABK73443.1
Conserved hypothetical protein.
  
    0.650
rfbD
dTDP-4-dehydrorhamnose reductase; Involved in the biosynthesis of the dTDP-L-rhamnose which is a component of the critical linker, D-N-acetylglucosamine-L-rhamnose disaccharide, which connects the galactan region of arabinogalactan to peptidoglycan via a phosphodiester linkage. Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L- rhamnose (By similarity); Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.642
ABK73029.1
Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily.
 
  
 0.631
ABK71650.1
Conserved hypothetical protein.
  
    0.630
ABK73397.1
Conserved hypothetical protein.
  
    0.625
ABK72280.1
Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
 
  
0.623
ABK70500.1
Conserved hypothetical protein.
  
    0.611
ABK70495.1
Conserved hypothetical protein.
  
    0.590
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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