Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70852.1 | pstA | MSMEG_5346 | MSMEG_5780 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. | 0.816 |
| ABK74211.1 | phoU | MSMEG_6423 | MSMEG_1605 | Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.432 |
| ABK74211.1 | phoU-2 | MSMEG_6423 | MSMEG_5776 | Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.430 |
| ABK74211.1 | pstA | MSMEG_6423 | MSMEG_5780 | Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009. | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. | 0.634 |
| phnC | phnD | MSMEG_0647 | MSMEG_0649 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | 0.999 |
| phnC | phoU | MSMEG_0647 | MSMEG_1605 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.706 |
| phnC | phoU-2 | MSMEG_0647 | MSMEG_5776 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.709 |
| phnC | pstA | MSMEG_0647 | MSMEG_5780 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. | 0.635 |
| phnC | pstB | MSMEG_0647 | MSMEG_5779 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.431 |
| phnC | pstS | MSMEG_0647 | MSMEG_5782 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.698 |
| phnD | phnC | MSMEG_0649 | MSMEG_0647 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | 0.999 |
| phnD | phoU | MSMEG_0649 | MSMEG_1605 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.502 |
| phnD | phoU-2 | MSMEG_0649 | MSMEG_5776 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.501 |
| phnD | pstA | MSMEG_0649 | MSMEG_5780 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. | 0.680 |
| phnD | pstB | MSMEG_0649 | MSMEG_5779 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.709 |
| phnD | pstC | MSMEG_0649 | MSMEG_5781 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.434 |
| phnD | pstS | MSMEG_0649 | MSMEG_5782 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.914 |
| phoU | ABK74211.1 | MSMEG_1605 | MSMEG_6423 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009. | 0.432 |
| phoU | phnC | MSMEG_1605 | MSMEG_0647 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | 0.706 |
| phoU | phnD | MSMEG_1605 | MSMEG_0649 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | 0.502 |
page 1 of 4