Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK73512.1 | phnD | MSMEG_1064 | MSMEG_0649 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | 0.640 |
| ABK73512.1 | phoU | MSMEG_1064 | MSMEG_1605 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.496 |
| ABK73512.1 | phoU-2 | MSMEG_1064 | MSMEG_5776 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.533 |
| ABK73512.1 | ppk | MSMEG_1064 | MSMEG_2391 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.636 |
| ABK73512.1 | pstA | MSMEG_1064 | MSMEG_5780 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. | 0.407 |
| ABK73512.1 | pstB | MSMEG_1064 | MSMEG_5779 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.851 |
| ABK73512.1 | pstC | MSMEG_1064 | MSMEG_5781 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.579 |
| ABK73512.1 | pstS | MSMEG_1064 | MSMEG_5782 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.935 |
| ABK73512.1 | senX3 | MSMEG_1064 | MSMEG_0936 | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | Sensor histidine kinase SenX3; Part of the two-component regulatory system SenX3/RegX3. Phosphorylates RegX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to SenX3 by the PstSCAB phosphate transporter system. | 0.728 |
| phnC | phnD | MSMEG_0647 | MSMEG_0649 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | 0.999 |
| phnC | phoU | MSMEG_0647 | MSMEG_1605 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.706 |
| phnC | phoU-2 | MSMEG_0647 | MSMEG_5776 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.709 |
| phnC | pstA | MSMEG_0647 | MSMEG_5780 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. | 0.635 |
| phnC | pstB | MSMEG_0647 | MSMEG_5779 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.431 |
| phnC | pstS | MSMEG_0647 | MSMEG_5782 | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.698 |
| phnD | ABK73512.1 | MSMEG_0649 | MSMEG_1064 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate/sulphate permease; Identified by match to protein family HMM PF01384. | 0.640 |
| phnD | phnC | MSMEG_0649 | MSMEG_0647 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | 0.999 |
| phnD | phoU | MSMEG_0649 | MSMEG_1605 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.502 |
| phnD | phoU-2 | MSMEG_0649 | MSMEG_5776 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.501 |
| phnD | pstA | MSMEG_0649 | MSMEG_5780 | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. | 0.680 |
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